Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 KRT16P6-202ENST00000425692 1426 ntBASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC026310.3-201ENST00000625186 2373 ntBASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC093458.2-201ENST00000623150 629 ntBASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP4-1Q9BYQ7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 SLC25A1P2-201ENST00000430693 912 ntBASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 KRT18P48-201ENST00000434763 852 ntBASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 TPM4P1-201ENST00000436100 807 ntBASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 LINC01238-205ENST00000567549 1107 ntBASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC010653.2-201ENST00000623505 997 ntBASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC005332.1-201ENST00000577698 1310 ntBASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC092720.2-201ENST00000602388 1665 ntBASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms