Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 OR2A1-AS1-201ENST00000462305 773 ntBASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 AP001271.2-201ENST00000624018 1556 ntBASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 PKD1P1-201ENST00000458669 6805 ntBASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17■□□□□ 0.31
HIST1H2AAQ96QV6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 NCF1B-203ENST00000435988 1254 ntBASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HIST1H2AAQ96QV6 AC009237.14-201ENST00000609975 1594 ntBASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 DUSP5P2-201ENST00000426873 1033 ntBASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 AC092118.2-201ENST00000613495 667 ntBASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 PHGDH-210ENST00000641115 1638 ntBASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H2AAQ96QV6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 TSPY6P-201ENST00000448518 926 ntBASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 AC097658.1-201ENST00000475555 843 ntBASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H2AAQ96QV6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms