Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPRD1AQ96P16 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.24■□□□□ 0.83
RPRD1AQ96P16 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.23■□□□□ 0.83
RPRD1AQ96P16 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 TMEM179-206ENST00000616017 1645 ntBASIC20.23■□□□□ 0.83
RPRD1AQ96P16 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPRD1AQ96P16 HTR7P1-201ENST00000538670 1336 ntBASIC20.23■□□□□ 0.83
RPRD1AQ96P16 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 MIR718-201ENST00000390190 70 ntBASIC20.22■□□□□ 0.83
RPRD1AQ96P16 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 TUBB8P6-201ENST00000436895 1288 ntBASIC20.22■□□□□ 0.83
RPRD1AQ96P16 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 RPS2P4-201ENST00000476944 856 ntBASIC20.22■□□□□ 0.83
RPRD1AQ96P16 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 KRT18P16-201ENST00000510337 1294 ntBASIC20.22■□□□□ 0.83
RPRD1AQ96P16 RARRES2P10-201ENST00000564312 460 ntBASIC20.22■□□□□ 0.83
RPRD1AQ96P16 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RPRD1AQ96P16 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPRD1AQ96P16 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms