Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 IRS3P-201ENST00000223076 1006 ntBASIC16.88■□□□□ 0.29
CMTM3Q96MX0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 AL354751.1-201ENST00000412768 1863 ntBASIC16.88■□□□□ 0.29
CMTM3Q96MX0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.87■□□□□ 0.29
CMTM3Q96MX0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 AP001160.3-201ENST00000601484 763 ntBASIC16.87■□□□□ 0.29
CMTM3Q96MX0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 WIZP1-201ENST00000531444 2299 ntBASIC16.87■□□□□ 0.29
CMTM3Q96MX0 PHGDH-210ENST00000641115 1638 ntBASIC16.87■□□□□ 0.29
CMTM3Q96MX0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 RASA4CP-201ENST00000424092 1398 ntBASIC16.87■□□□□ 0.29
CMTM3Q96MX0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.87■□□□□ 0.29
CMTM3Q96MX0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 NOC2LP1-202ENST00000452600 2235 ntBASIC16.86■□□□□ 0.29
CMTM3Q96MX0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.86■□□□□ 0.29
CMTM3Q96MX0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms