Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ITCHQ96J02 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.67■□□□□ 0.58
ITCHQ96J02 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.67■□□□□ 0.58
ITCHQ96J02 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.67■□□□□ 0.58
ITCHQ96J02 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ITCHQ96J02 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
ITCHQ96J02 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ITCHQ96J02 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ITCHQ96J02 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.67■□□□□ 0.58
ITCHQ96J02 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
ITCHQ96J02 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ITCHQ96J02 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ITCHQ96J02 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ITCHQ96J02 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.66■□□□□ 0.58
ITCHQ96J02 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.66■□□□□ 0.58
ITCHQ96J02 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.66■□□□□ 0.58
ITCHQ96J02 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.66■□□□□ 0.58
ITCHQ96J02 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.66■□□□□ 0.58
ITCHQ96J02 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.66■□□□□ 0.58
ITCHQ96J02 OR10C1-204ENST00000622521 1039 ntBASIC18.66■□□□□ 0.58
ITCHQ96J02 AC231657.2-201ENST00000624556 255 ntBASIC18.66■□□□□ 0.58
ITCHQ96J02 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITCHQ96J02 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.65■□□□□ 0.58
ITCHQ96J02 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ITCHQ96J02 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ITCHQ96J02 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.65■□□□□ 0.58
ITCHQ96J02 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.65■□□□□ 0.58
ITCHQ96J02 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 AC006015.1-201ENST00000429970 570 ntBASIC18.65■□□□□ 0.58
ITCHQ96J02 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.65■□□□□ 0.58
ITCHQ96J02 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.65■□□□□ 0.58
ITCHQ96J02 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 AC010980.2-201ENST00000587099 1412 ntBASIC18.65■□□□□ 0.58
ITCHQ96J02 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITCHQ96J02 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ITCHQ96J02 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ITCHQ96J02 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ITCHQ96J02 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ITCHQ96J02 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
ITCHQ96J02 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ITCHQ96J02 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ITCHQ96J02 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.64■□□□□ 0.57
ITCHQ96J02 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ITCHQ96J02 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms