Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE2Q96FN4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 AL158211.5-201ENST00000623583 2518 ntBASIC17.02■□□□□ 0.32
CPNE2Q96FN4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 AC116562.4-201ENST00000641316 2276 ntBASIC17.02■□□□□ 0.32
CPNE2Q96FN4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 AC231657.2-201ENST00000624556 255 ntBASIC17.02■□□□□ 0.32
CPNE2Q96FN4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CPNE2Q96FN4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CPNE2Q96FN4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE2Q96FN4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE2Q96FN4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
CPNE2Q96FN4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE2Q96FN4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CPNE2Q96FN4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
CPNE2Q96FN4 AC018445.3-201ENST00000624177 1945 ntBASIC17.02■□□□□ 0.31
CPNE2Q96FN4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 AC098818.2-201ENST00000564925 2320 ntBASIC17.01■□□□□ 0.31
CPNE2Q96FN4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 AC023632.3-201ENST00000521633 145 ntBASIC17.01■□□□□ 0.31
CPNE2Q96FN4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 CYP2T3P-201ENST00000601990 817 ntBASIC17.01■□□□□ 0.31
CPNE2Q96FN4 TREX1-205ENST00000625293 1783 ntBASIC17.01■□□□□ 0.31
CPNE2Q96FN4 AC068338.2-201ENST00000563278 1430 ntBASIC17.01■□□□□ 0.31
CPNE2Q96FN4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE2Q96FN4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17■□□□□ 0.31
CPNE2Q96FN4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17■□□□□ 0.31
CPNE2Q96FN4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CPNE2Q96FN4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17■□□□□ 0.31
CPNE2Q96FN4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17■□□□□ 0.31
CPNE2Q96FN4 CYP2T1P-201ENST00000432607 1285 ntBASIC17■□□□□ 0.31
CPNE2Q96FN4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17■□□□□ 0.31
CPNE2Q96FN4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17■□□□□ 0.31
CPNE2Q96FN4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17■□□□□ 0.31
CPNE2Q96FN4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17■□□□□ 0.31
CPNE2Q96FN4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17■□□□□ 0.31
CPNE2Q96FN4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17■□□□□ 0.31
CPNE2Q96FN4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CPNE2Q96FN4 AC120498.9-201ENST00000339021 3867 ntBASIC17■□□□□ 0.31
CPNE2Q96FN4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17■□□□□ 0.31
CPNE2Q96FN4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms