Protein–RNA interactions for Protein: Q8WW12

PCNP, PEST proteolytic signal-containing nuclear protein, humanhuman

Known RBP Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPQ8WW12 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNPQ8WW12 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PCNPQ8WW12 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
PCNPQ8WW12 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.25■□□□□ 0.19
PCNPQ8WW12 MIR4281-201ENST00000580852 62 ntBASIC16.25■□□□□ 0.19
PCNPQ8WW12 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.25■□□□□ 0.19
PCNPQ8WW12 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.25■□□□□ 0.19
PCNPQ8WW12 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.25■□□□□ 0.19
PCNPQ8WW12 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNPQ8WW12 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 KRT18P24-201ENST00000344739 1156 ntBASIC16.24■□□□□ 0.19
PCNPQ8WW12 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 SNX5-217ENST00000606557 1087 ntBASIC16.24■□□□□ 0.19
PCNPQ8WW12 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 AC011484.1-201ENST00000377652 1995 ntBASIC16.24■□□□□ 0.19
PCNPQ8WW12 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.24■□□□□ 0.19
PCNPQ8WW12 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNPQ8WW12 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 PKD1P1-201ENST00000458669 6805 ntBASIC16.23■□□□□ 0.19
PCNPQ8WW12 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 PVT1_1.1-201ENST00000615125 194 ntBASIC16.23■□□□□ 0.19
PCNPQ8WW12 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 AC018695.7-201ENST00000624587 2492 ntBASIC16.23■□□□□ 0.19
PCNPQ8WW12 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCNPQ8WW12 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.23■□□□□ 0.19
PCNPQ8WW12 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCNPQ8WW12 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCNPQ8WW12 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCNPQ8WW12 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.22■□□□□ 0.19
PCNPQ8WW12 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCNPQ8WW12 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCNPQ8WW12 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.22■□□□□ 0.19
PCNPQ8WW12 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCNPQ8WW12 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCNPQ8WW12 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.22■□□□□ 0.19
PCNPQ8WW12 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCNPQ8WW12 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCNPQ8WW12 AL031848.2-201ENST00000607670 837 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms