Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 AC068338.2-201ENST00000563278 1430 ntBASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 AC141586.3-201ENST00000562166 1838 ntBASIC17.17■□□□□ 0.34
RPS4Y2Q8TD47 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPS4Y2Q8TD47 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 AC016769.1-201ENST00000409132 1010 ntBASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 KRT18P11-201ENST00000435214 1283 ntBASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 TEX21P-204ENST00000641479 1693 ntBASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 AC006333.2-201ENST00000607957 2099 ntBASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPS4Y2Q8TD47 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RPS4Y2Q8TD47 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms