Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC10.79□□□□□ -0.68
SPTSSBQ8NFR3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SPTSSBQ8NFR3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 AC009053.2-201ENST00000563701 2365 ntBASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SPTSSBQ8NFR3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
SPTSSBQ8NFR3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 AC084018.2-201ENST00000613093 2607 ntBASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 AC093536.1-201ENST00000569153 554 ntBASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 AC009086.3-201ENST00000623486 1008 ntBASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 AC141586.5-201ENST00000624546 2050 ntBASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms