Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRFBP1Q8NEF9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 AP006587.1-201ENST00000534129 1502 ntBASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.72■□□□□ 0.59
SRFBP1Q8NEF9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 ESRRAP1-201ENST00000400596 1257 ntBASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRFBP1Q8NEF9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.71■□□□□ 0.58
SRFBP1Q8NEF9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 YBX1P10-201ENST00000444752 975 ntBASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SRFBP1Q8NEF9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms