Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SETD9Q8NE22 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SETD9Q8NE22 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SETD9Q8NE22 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SETD9Q8NE22 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SETD9Q8NE22 AC091799.1-201ENST00000422823 811 ntBASIC18.02■□□□□ 0.48
SETD9Q8NE22 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SETD9Q8NE22 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SETD9Q8NE22 TPRG1LP1-201ENST00000598702 760 ntBASIC18.02■□□□□ 0.48
SETD9Q8NE22 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SETD9Q8NE22 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.02■□□□□ 0.48
SETD9Q8NE22 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SETD9Q8NE22 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SETD9Q8NE22 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SETD9Q8NE22 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.02■□□□□ 0.47
SETD9Q8NE22 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SETD9Q8NE22 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.02■□□□□ 0.47
SETD9Q8NE22 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SETD9Q8NE22 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SETD9Q8NE22 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SETD9Q8NE22 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SETD9Q8NE22 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 AC099791.1-201ENST00000416440 715 ntBASIC18.01■□□□□ 0.47
SETD9Q8NE22 AC105265.2-201ENST00000467189 838 ntBASIC18.01■□□□□ 0.47
SETD9Q8NE22 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 AC012414.1-201ENST00000556676 535 ntBASIC18.01■□□□□ 0.47
SETD9Q8NE22 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 AC243732.1-201ENST00000612648 864 ntBASIC18.01■□□□□ 0.47
SETD9Q8NE22 AL355001.2-201ENST00000620617 1191 ntBASIC18.01■□□□□ 0.47
SETD9Q8NE22 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SETD9Q8NE22 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.01■□□□□ 0.47
SETD9Q8NE22 AC009113.1-201ENST00000570267 2443 ntBASIC18.01■□□□□ 0.47
SETD9Q8NE22 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SETD9Q8NE22 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SETD9Q8NE22 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SETD9Q8NE22 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 UNC93B3-201ENST00000308076 687 ntBASIC18■□□□□ 0.47
SETD9Q8NE22 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18■□□□□ 0.47
SETD9Q8NE22 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 AC131281.2-201ENST00000520478 145 ntBASIC18■□□□□ 0.47
SETD9Q8NE22 AC027682.1-201ENST00000562846 899 ntBASIC18■□□□□ 0.47
SETD9Q8NE22 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SETD9Q8NE22 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18■□□□□ 0.47
SETD9Q8NE22 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18■□□□□ 0.47
SETD9Q8NE22 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18■□□□□ 0.47
SETD9Q8NE22 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 AC097381.1-201ENST00000429019 1296 ntBASIC17.99■□□□□ 0.47
SETD9Q8NE22 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 AL356652.1-201ENST00000615962 565 ntBASIC17.99■□□□□ 0.47
SETD9Q8NE22 AL035685.1-201ENST00000636663 812 ntBASIC17.99■□□□□ 0.47
SETD9Q8NE22 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SETD9Q8NE22 AC005332.8-201ENST00000622750 2735 ntBASIC17.99■□□□□ 0.47
SETD9Q8NE22 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.99■□□□□ 0.47
SETD9Q8NE22 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.98■□□□□ 0.47
SETD9Q8NE22 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.98■□□□□ 0.47
SETD9Q8NE22 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SETD9Q8NE22 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SETD9Q8NE22 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SETD9Q8NE22 AC104581.1-202ENST00000635932 2618 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms