Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS52Q8N1B4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.27■□□□□ 0.99
VPS52Q8N1B4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 AP000525.1-201ENST00000608286 694 ntBASIC21.26■□□□□ 0.99
VPS52Q8N1B4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 MIR6786-201ENST00000616843 113 ntBASIC21.26■□□□□ 0.99
VPS52Q8N1B4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS52Q8N1B4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 KRT8P9-201ENST00000558927 1449 ntBASIC21.25■□□□□ 0.99
VPS52Q8N1B4 AC145285.6-201ENST00000604632 637 ntBASIC21.25■□□□□ 0.99
VPS52Q8N1B4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 CR392000.1-201ENST00000624770 1228 ntBASIC21.25■□□□□ 0.99
VPS52Q8N1B4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 FEM1AP1-201ENST00000431297 1995 ntBASIC21.25■□□□□ 0.99
VPS52Q8N1B4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS52Q8N1B4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 MIR1238-201ENST00000408483 83 ntBASIC21.24■□□□□ 0.99
VPS52Q8N1B4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS52Q8N1B4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 KSR1P1-201ENST00000446298 240 ntBASIC21.23■□□□□ 0.99
VPS52Q8N1B4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS52Q8N1B4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 NIFKP9-201ENST00000419265 221 ntBASIC21.22■□□□□ 0.99
VPS52Q8N1B4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms