Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA6Q8N139 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
ABCA6Q8N139 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA6Q8N139 PRSS44-201ENST00000515154 1146 ntBASIC29.25■■■□□ 2.27
ABCA6Q8N139 AL512604.3-201ENST00000569583 964 ntBASIC29.25■■■□□ 2.27
ABCA6Q8N139 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC29.25■■■□□ 2.27
ABCA6Q8N139 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA6Q8N139 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA6Q8N139 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA6Q8N139 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA6Q8N139 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC29.24■■■□□ 2.27
ABCA6Q8N139 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA6Q8N139 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC29.24■■■□□ 2.27
ABCA6Q8N139 NT5C-210ENST00000582160 860 ntTSL 2 BASIC29.24■■■□□ 2.27
ABCA6Q8N139 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC29.24■■■□□ 2.27
ABCA6Q8N139 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
ABCA6Q8N139 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA6Q8N139 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC29.24■■■□□ 2.27
ABCA6Q8N139 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA6Q8N139 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC29.24■■■□□ 2.27
ABCA6Q8N139 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA6Q8N139 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 SNX5-210ENST00000481323 562 ntTSL 3 BASIC29.23■■■□□ 2.27
ABCA6Q8N139 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC29.23■■■□□ 2.27
ABCA6Q8N139 AL691432.3-201ENST00000621860 400 ntBASIC29.23■■■□□ 2.27
ABCA6Q8N139 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC29.23■■■□□ 2.27
ABCA6Q8N139 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC29.23■■■□□ 2.27
ABCA6Q8N139 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC29.23■■■□□ 2.27
ABCA6Q8N139 KRT16P6-202ENST00000425692 1426 ntBASIC29.23■■■□□ 2.27
ABCA6Q8N139 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC29.23■■■□□ 2.27
ABCA6Q8N139 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC29.23■■■□□ 2.27
ABCA6Q8N139 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA6Q8N139 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA6Q8N139 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA6Q8N139 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA6Q8N139 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC29.22■■■□□ 2.27
ABCA6Q8N139 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA6Q8N139 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
ABCA6Q8N139 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA6Q8N139 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA6Q8N139 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA6Q8N139 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA6Q8N139 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC29.22■■■□□ 2.27
ABCA6Q8N139 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC29.22■■■□□ 2.27
ABCA6Q8N139 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.22■■■□□ 2.27
ABCA6Q8N139 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC29.21■■■□□ 2.27
ABCA6Q8N139 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC29.21■■■□□ 2.27
ABCA6Q8N139 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC29.21■■■□□ 2.27
ABCA6Q8N139 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC29.21■■■□□ 2.27
ABCA6Q8N139 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA6Q8N139 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
ABCA6Q8N139 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC29.2■■■□□ 2.27
ABCA6Q8N139 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC29.2■■■□□ 2.27
ABCA6Q8N139 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
ABCA6Q8N139 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC29.2■■■□□ 2.27
ABCA6Q8N139 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
ABCA6Q8N139 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC29.2■■■□□ 2.26
ABCA6Q8N139 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ABCA6Q8N139 KRT8P8-201ENST00000434750 1448 ntBASIC29.2■■■□□ 2.26
ABCA6Q8N139 PLK5-205ENST00000642079 1969 ntBASIC29.2■■■□□ 2.26
ABCA6Q8N139 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ABCA6Q8N139 STARP1-201ENST00000397973 869 ntBASIC29.2■■■□□ 2.26
ABCA6Q8N139 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
ABCA6Q8N139 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC29.2■■■□□ 2.26
ABCA6Q8N139 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.2■■■□□ 2.26
ABCA6Q8N139 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC29.19■■■□□ 2.26
ABCA6Q8N139 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC29.19■■■□□ 2.26
ABCA6Q8N139 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC29.19■■■□□ 2.26
ABCA6Q8N139 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 LY6E-213ENST00000522528 606 ntTSL 3 BASIC29.19■■■□□ 2.26
ABCA6Q8N139 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC29.19■■■□□ 2.26
ABCA6Q8N139 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA6Q8N139 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC29.19■■■□□ 2.26
ABCA6Q8N139 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.18■■■□□ 2.26
ABCA6Q8N139 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms