Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 TERF1P2-201ENST00000583350 1212 ntBASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 AL031963.3-201ENST00000606441 850 ntBASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 PTBP1P-201ENST00000554374 1601 ntBASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM42Q8IWZ5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 KRT18P14-201ENST00000534205 1250 ntBASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM42Q8IWZ5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TRIM42Q8IWZ5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM42Q8IWZ5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM42Q8IWZ5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
TRIM42Q8IWZ5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 NEFHP1-201ENST00000412845 2629 ntBASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 KRT8P20-201ENST00000423953 1409 ntBASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM42Q8IWZ5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM42Q8IWZ5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms