Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 OR6D1P-202ENST00000641007 5290 ntBASIC16.29■□□□□ 0.2
ZNF546Q86UE3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.29■□□□□ 0.2
ZNF546Q86UE3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 BICD1-207ENST00000551848 1962 ntBASIC16.29■□□□□ 0.2
ZNF546Q86UE3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF546Q86UE3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 SMUG1P1-201ENST00000590640 811 ntBASIC16.28■□□□□ 0.2
ZNF546Q86UE3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 AL354751.1-201ENST00000412768 1863 ntBASIC16.28■□□□□ 0.2
ZNF546Q86UE3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF546Q86UE3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 AC009237.14-201ENST00000609975 1594 ntBASIC16.27■□□□□ 0.2
ZNF546Q86UE3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.27■□□□□ 0.2
ZNF546Q86UE3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
ZNF546Q86UE3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms