Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
LDB1Q86U70 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.59■□□□□ 0.73
LDB1Q86U70 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.59■□□□□ 0.73
LDB1Q86U70 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDB1Q86U70 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.58■□□□□ 0.73
LDB1Q86U70 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDB1Q86U70 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
LDB1Q86U70 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
LDB1Q86U70 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.58■□□□□ 0.73
LDB1Q86U70 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDB1Q86U70 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDB1Q86U70 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDB1Q86U70 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB1Q86U70 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.58■□□□□ 0.72
LDB1Q86U70 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LDB1Q86U70 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.58■□□□□ 0.72
LDB1Q86U70 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LDB1Q86U70 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDB1Q86U70 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDB1Q86U70 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDB1Q86U70 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB1Q86U70 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LDB1Q86U70 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB1Q86U70 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.57■□□□□ 0.72
LDB1Q86U70 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LDB1Q86U70 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.57■□□□□ 0.72
LDB1Q86U70 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
LDB1Q86U70 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.57■□□□□ 0.72
LDB1Q86U70 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.57■□□□□ 0.72
LDB1Q86U70 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LDB1Q86U70 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.57■□□□□ 0.72
LDB1Q86U70 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.57■□□□□ 0.72
LDB1Q86U70 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDB1Q86U70 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.57■□□□□ 0.72
LDB1Q86U70 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.57■□□□□ 0.72
LDB1Q86U70 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.57■□□□□ 0.72
LDB1Q86U70 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.56■□□□□ 0.72
LDB1Q86U70 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LDB1Q86U70 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB1Q86U70 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB1Q86U70 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.56■□□□□ 0.72
LDB1Q86U70 RNA5SP413-201ENST00000516373 109 ntBASIC19.56■□□□□ 0.72
LDB1Q86U70 AC120498.8-201ENST00000614275 531 ntBASIC19.56■□□□□ 0.72
LDB1Q86U70 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.56■□□□□ 0.72
LDB1Q86U70 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB1Q86U70 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LDB1Q86U70 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.56■□□□□ 0.72
LDB1Q86U70 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LDB1Q86U70 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.56■□□□□ 0.72
LDB1Q86U70 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB1Q86U70 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LDB1Q86U70 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.56■□□□□ 0.72
LDB1Q86U70 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.56■□□□□ 0.72
LDB1Q86U70 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.56■□□□□ 0.72
LDB1Q86U70 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.56■□□□□ 0.72
LDB1Q86U70 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.56■□□□□ 0.72
LDB1Q86U70 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB1Q86U70 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.55■□□□□ 0.72
LDB1Q86U70 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.55■□□□□ 0.72
LDB1Q86U70 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.55■□□□□ 0.72
LDB1Q86U70 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LDB1Q86U70 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.55■□□□□ 0.72
LDB1Q86U70 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LDB1Q86U70 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.55■□□□□ 0.72
LDB1Q86U70 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.55■□□□□ 0.72
LDB1Q86U70 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.55■□□□□ 0.72
LDB1Q86U70 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.55■□□□□ 0.72
LDB1Q86U70 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.55■□□□□ 0.72
LDB1Q86U70 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.55■□□□□ 0.72
LDB1Q86U70 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
LDB1Q86U70 AC008687.6-201ENST00000596318 630 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms