Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
PACS1Q6VY07 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.81■□□□□ 0.76
PACS1Q6VY07 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.81■□□□□ 0.76
PACS1Q6VY07 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.81■□□□□ 0.76
PACS1Q6VY07 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.81■□□□□ 0.76
PACS1Q6VY07 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS1Q6VY07 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PACS1Q6VY07 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PACS1Q6VY07 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.8■□□□□ 0.76
PACS1Q6VY07 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.8■□□□□ 0.76
PACS1Q6VY07 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PACS1Q6VY07 HLA-B-256ENST00000639848 1089 ntBASIC19.8■□□□□ 0.76
PACS1Q6VY07 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PACS1Q6VY07 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS1Q6VY07 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.8■□□□□ 0.76
PACS1Q6VY07 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 TNXA-203ENST00000507684 2038 ntBASIC19.79■□□□□ 0.76
PACS1Q6VY07 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.79■□□□□ 0.76
PACS1Q6VY07 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS1Q6VY07 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PACS1Q6VY07 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.78■□□□□ 0.76
PACS1Q6VY07 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 PHGDH-210ENST00000641115 1638 ntBASIC19.78■□□□□ 0.76
PACS1Q6VY07 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.78■□□□□ 0.76
PACS1Q6VY07 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.78■□□□□ 0.76
PACS1Q6VY07 AC005829.2-201ENST00000571422 1056 ntBASIC19.78■□□□□ 0.76
PACS1Q6VY07 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.78■□□□□ 0.76
PACS1Q6VY07 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PACS1Q6VY07 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.78■□□□□ 0.76
PACS1Q6VY07 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PACS1Q6VY07 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS1Q6VY07 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PACS1Q6VY07 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS1Q6VY07 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms