Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.69■□□□□ 0.74
BRAT1Q6PJG6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRAT1Q6PJG6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRAT1Q6PJG6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRAT1Q6PJG6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.69■□□□□ 0.74
BRAT1Q6PJG6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.69■□□□□ 0.74
BRAT1Q6PJG6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.69■□□□□ 0.74
BRAT1Q6PJG6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 AC073195.1-201ENST00000607241 877 ntBASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.68■□□□□ 0.74
BRAT1Q6PJG6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 NIFKP9-201ENST00000419265 221 ntBASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 MIR4497-201ENST00000583208 89 ntBASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 AC113410.3-201ENST00000623366 203 ntBASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 KRT8P8-201ENST00000434750 1448 ntBASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
BRAT1Q6PJG6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 AL596275.1-201ENST00000423464 877 ntBASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 KSR1P1-201ENST00000446298 240 ntBASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRAT1Q6PJG6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 SNORA78-201ENST00000459373 127 ntBASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
BRAT1Q6PJG6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
BRAT1Q6PJG6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.64■□□□□ 0.74
BRAT1Q6PJG6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BRAT1Q6PJG6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRAT1Q6PJG6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRAT1Q6PJG6 AC112907.3-201ENST00000577781 2400 ntBASIC19.64■□□□□ 0.74
BRAT1Q6PJG6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BRAT1Q6PJG6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms