Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 AL136967.2-201ENST00000623968 743 ntBASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 RASA4CP-201ENST00000424092 1398 ntBASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDPF1Q6NVV7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 AC026271.2-201ENST00000428091 497 ntBASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 MIR4767-201ENST00000582827 78 ntBASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.88□□□□□ -0.03
CDPF1Q6NVV7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDPF1Q6NVV7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms