Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 TMEM191A-211ENST00000637163 1067 ntBASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 YBX1P10-201ENST00000444752 975 ntBASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 AC098590.1-201ENST00000468126 897 ntBASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 RPPH1-201ENST00000516869 333 ntBASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP4R3AQ6IN85 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 NBPF21P-201ENST00000425093 1451 ntBASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 AC239809.2-201ENST00000415381 517 ntBASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 C1QBPP2-201ENST00000528754 825 ntBASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R3AQ6IN85 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 PCDHAC2-203ENST00000615316 3011 ntBASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.29■■□□□ 1.16
PPP4R3AQ6IN85 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 KRASP1-201ENST00000407852 552 ntBASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 GCSHP5-201ENST00000443090 522 ntBASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 KRT18P16-201ENST00000510337 1294 ntBASIC22.28■■□□□ 1.16
PPP4R3AQ6IN85 AC110285.5-201ENST00000611501 352 ntBASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms