Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC009947.2-201ENST00000444014 672 ntBASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 TSPY17P-201ENST00000450329 467 ntBASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 AC011558.1-201ENST00000623459 338 ntBASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 AL121956.5-201ENST00000625261 221 ntBASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 AL031432.5-201ENST00000641059 760 ntBASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 AC006128.1-201ENST00000624704 1661 ntBASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD4Q5XG99 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 HOMER2P1-201ENST00000455653 964 ntBASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 Z85996.1-201ENST00000494644 937 ntBASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LYSMD4Q5XG99 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 TMEM179-206ENST00000616017 1645 ntBASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 PCED1CP-201ENST00000419887 785 ntBASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 KRT126P-201ENST00000549467 1181 ntBASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 AL023803.3-201ENST00000615559 522 ntBASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 AC007225.1-201ENST00000566331 1836 ntBASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD4Q5XG99 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 IER3-202ENST00000376377 1350 ntBASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD4Q5XG99 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 KRT8P8-201ENST00000434750 1448 ntBASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms