Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC38Q5VT99 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC38Q5VT99 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 AC092368.3-202ENST00000574180 1591 ntBASIC20.38■□□□□ 0.85
LRRC38Q5VT99 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 AC060766.5-201ENST00000590539 871 ntBASIC20.38■□□□□ 0.85
LRRC38Q5VT99 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC38Q5VT99 AC098818.2-201ENST00000564925 2320 ntBASIC20.38■□□□□ 0.85
LRRC38Q5VT99 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.37■□□□□ 0.85
LRRC38Q5VT99 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 AP000974.1-201ENST00000623909 2387 ntBASIC20.37■□□□□ 0.85
LRRC38Q5VT99 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC38Q5VT99 AC124283.5-201ENST00000624661 1809 ntBASIC20.37■□□□□ 0.85
LRRC38Q5VT99 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.36■□□□□ 0.85
LRRC38Q5VT99 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 PNMA6B-201ENST00000538162 1200 ntBASIC20.36■□□□□ 0.85
LRRC38Q5VT99 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 AL121906.2-201ENST00000621597 723 ntBASIC20.36■□□□□ 0.85
LRRC38Q5VT99 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC38Q5VT99 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 AC087289.5-201ENST00000586076 3175 ntBASIC20.35■□□□□ 0.85
LRRC38Q5VT99 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 AC083880.1-201ENST00000608266 535 ntBASIC20.35■□□□□ 0.85
LRRC38Q5VT99 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LRRC38Q5VT99 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms