Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.93■■□□□ 1.42
TTC39AQ5SRH9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TTC39AQ5SRH9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 FAM197Y1-201ENST00000421178 764 ntBASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 AC073195.1-201ENST00000607241 877 ntBASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.91■■□□□ 1.42
TTC39AQ5SRH9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 CD177P1-201ENST00000606252 935 ntBASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 AL353708.3-201ENST00000610272 989 ntBASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TTC39AQ5SRH9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
TTC39AQ5SRH9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TTC39AQ5SRH9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TTC39AQ5SRH9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
TTC39AQ5SRH9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.89■■□□□ 1.42
TTC39AQ5SRH9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TTC39AQ5SRH9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TTC39AQ5SRH9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 NIFKP9-201ENST00000419265 221 ntBASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
TTC39AQ5SRH9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39AQ5SRH9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39AQ5SRH9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TTC39AQ5SRH9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TTC39AQ5SRH9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39AQ5SRH9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39AQ5SRH9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TTC39AQ5SRH9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TTC39AQ5SRH9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms