Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH11P55287 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH11P55287 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CDH11P55287 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH11P55287 PGM5P4-201ENST00000421970 445 ntBASIC17.94■□□□□ 0.46
CDH11P55287 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.94■□□□□ 0.46
CDH11P55287 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH11P55287 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH11P55287 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.94■□□□□ 0.46
CDH11P55287 AC092118.2-201ENST00000613495 667 ntBASIC17.94■□□□□ 0.46
CDH11P55287 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH11P55287 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH11P55287 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH11P55287 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH11P55287 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH11P55287 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH11P55287 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH11P55287 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH11P55287 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH11P55287 Z82202.1-201ENST00000623446 1880 ntBASIC17.93■□□□□ 0.46
CDH11P55287 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH11P55287 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH11P55287 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH11P55287 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CDH11P55287 TSPY20P-201ENST00000450910 630 ntBASIC17.93■□□□□ 0.46
CDH11P55287 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH11P55287 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH11P55287 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH11P55287 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDH11P55287 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH11P55287 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH11P55287 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH11P55287 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH11P55287 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH11P55287 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDH11P55287 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH11P55287 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH11P55287 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CDH11P55287 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH11P55287 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.92■□□□□ 0.46
CDH11P55287 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDH11P55287 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDH11P55287 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH11P55287 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH11P55287 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH11P55287 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CDH11P55287 AC010980.2-201ENST00000587099 1412 ntBASIC17.91■□□□□ 0.46
CDH11P55287 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH11P55287 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH11P55287 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDH11P55287 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDH11P55287 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH11P55287 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 RNA5SP413-201ENST00000516373 109 ntBASIC17.91■□□□□ 0.46
CDH11P55287 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH11P55287 AL356652.1-201ENST00000615962 565 ntBASIC17.91■□□□□ 0.46
CDH11P55287 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms