Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.97■□□□□ 0.95
RAD23BP54727 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAD23BP54727 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RAD23BP54727 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.97■□□□□ 0.95
RAD23BP54727 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
RAD23BP54727 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.97■□□□□ 0.95
RAD23BP54727 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAD23BP54727 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RAD23BP54727 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAD23BP54727 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RAD23BP54727 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RAD23BP54727 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RAD23BP54727 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RAD23BP54727 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
RAD23BP54727 PRORSD1P-201ENST00000295112 541 ntBASIC20.96■□□□□ 0.95
RAD23BP54727 KRT18P29-201ENST00000397031 1267 ntBASIC20.96■□□□□ 0.95
RAD23BP54727 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.96■□□□□ 0.95
RAD23BP54727 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.96■□□□□ 0.95
RAD23BP54727 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.96■□□□□ 0.95
RAD23BP54727 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.96■□□□□ 0.95
RAD23BP54727 AL023875.1-201ENST00000640777 796 ntBASIC20.96■□□□□ 0.95
RAD23BP54727 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RAD23BP54727 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.96■□□□□ 0.95
RAD23BP54727 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RAD23BP54727 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.96■□□□□ 0.95
RAD23BP54727 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAD23BP54727 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RAD23BP54727 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RAD23BP54727 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.95■□□□□ 0.94
RAD23BP54727 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.95■□□□□ 0.94
RAD23BP54727 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RAD23BP54727 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RAD23BP54727 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.95■□□□□ 0.94
RAD23BP54727 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RAD23BP54727 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.95■□□□□ 0.94
RAD23BP54727 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.95■□□□□ 0.94
RAD23BP54727 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RAD23BP54727 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RAD23BP54727 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RAD23BP54727 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.95■□□□□ 0.94
RAD23BP54727 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.95■□□□□ 0.94
RAD23BP54727 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.95■□□□□ 0.94
RAD23BP54727 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.95■□□□□ 0.94
RAD23BP54727 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAD23BP54727 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.95■□□□□ 0.94
RAD23BP54727 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RAD23BP54727 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RAD23BP54727 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 AP006587.1-201ENST00000534129 1502 ntBASIC20.94■□□□□ 0.94
RAD23BP54727 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.94■□□□□ 0.94
RAD23BP54727 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.94■□□□□ 0.94
RAD23BP54727 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.94■□□□□ 0.94
RAD23BP54727 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
RAD23BP54727 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.94■□□□□ 0.94
RAD23BP54727 PRKY-204ENST00000533551 1019 ntBASIC20.94■□□□□ 0.94
RAD23BP54727 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.94■□□□□ 0.94
RAD23BP54727 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.94■□□□□ 0.94
RAD23BP54727 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.94■□□□□ 0.94
RAD23BP54727 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.94■□□□□ 0.94
RAD23BP54727 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.94■□□□□ 0.94
RAD23BP54727 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAD23BP54727 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
RAD23BP54727 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RAD23BP54727 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RAD23BP54727 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
RAD23BP54727 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.93■□□□□ 0.94
RAD23BP54727 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.93■□□□□ 0.94
RAD23BP54727 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms