Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 MAX-215ENST00000556892 474 ntTSL 514.73□□□□□ -0.053e-6■■■□□ 16.5
SUB1P53999 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.63□□□□□ -0.073e-6■■■□□ 16.5
SUB1P53999 PILRB-210ENST00000457519 2074 ntTSL 1 (best)14.55□□□□□ -0.083e-6■■■□□ 16.5
SUB1P53999 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.48□□□□□ -0.097e-9■■■□□ 16.5
SUB1P53999 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.143e-6■■■□□ 16.5
SUB1P53999 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.153e-6■■■□□ 16.5
SUB1P53999 PILRB-201ENST00000419749 1506 ntTSL 1 (best)14.07□□□□□ -0.163e-6■■■□□ 16.5
SUB1P53999 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.05□□□□□ -0.163e-6■■■□□ 16.5
SUB1P53999 LRCH4-202ENST00000467201 4754 ntTSL 213.9□□□□□ -0.193e-6■■■□□ 16.5
SUB1P53999 RAB4A-202ENST00000473894 708 ntTSL 313.75□□□□□ -0.213e-6■■■□□ 16.5
SUB1P53999 SBDS-202ENST00000414306 1531 ntTSL 513.68□□□□□ -0.223e-6■■■□□ 16.5
SUB1P53999 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.233e-6■■■□□ 16.5
SUB1P53999 PANK4-202ENST00000435556 2524 ntTSL 213.61□□□□□ -0.233e-6■■■□□ 16.5
SUB1P53999 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.263e-6■■■□□ 16.5
SUB1P53999 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.263e-6■■■□□ 16.5
SUB1P53999 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.33e-6■■■□□ 16.5
SUB1P53999 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.363e-6■■■□□ 16.5
SUB1P53999 CARM1-203ENST00000586221 2766 ntTSL 1 (best)12.75□□□□□ -0.373e-6■■■□□ 16.5
SUB1P53999 HDAC6-220ENST00000477528 4832 ntTSL 1 (best)12.64□□□□□ -0.397e-9■■■□□ 16.5
SUB1P53999 LAMA5-208ENST00000474128 579 ntTSL 312.58□□□□□ -0.43e-6■■■□□ 16.5
SUB1P53999 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.47e-9■■■□□ 16.5
SUB1P53999 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.51□□□□□ -0.417e-9■■■□□ 16.5
SUB1P53999 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.413e-6■■■□□ 16.5
SUB1P53999 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.413e-6■■■□□ 16.5
SUB1P53999 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.457e-9■■■□□ 16.5
SUB1P53999 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.21□□□□□ -0.463e-6■■■□□ 16.5
SUB1P53999 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.463e-6■■■□□ 16.5
SUB1P53999 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.463e-6■■■□□ 16.5
SUB1P53999 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.473e-6■■■□□ 16.5
SUB1P53999 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.497e-9■■■□□ 16.5
SUB1P53999 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.493e-6■■■□□ 16.5
SUB1P53999 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.53e-6■■■□□ 16.5
SUB1P53999 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.513e-6■■■□□ 16.5
SUB1P53999 TECR-210ENST00000597607 1164 ntTSL 311.89□□□□□ -0.513e-6■■■□□ 16.5
SUB1P53999 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.84□□□□□ -0.513e-6■■■□□ 16.5
SUB1P53999 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.523e-6■■■□□ 16.5
SUB1P53999 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.533e-6■■■□□ 16.5
SUB1P53999 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.69□□□□□ -0.543e-6■■■□□ 16.5
SUB1P53999 STAG3L5P-PVRIG2P-PILRB-202ENST00000444874 2661 ntTSL 211.53□□□□□ -0.563e-6■■■□□ 16.5
SUB1P53999 LRCH4-210ENST00000498539 819 ntTSL 311.51□□□□□ -0.573e-6■■■□□ 16.5
SUB1P53999 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.33□□□□□ -0.63e-6■■■□□ 16.5
SUB1P53999 TECR-225ENST00000601652 551 ntTSL 411.3□□□□□ -0.63e-6■■■□□ 16.5
SUB1P53999 PILRB-211ENST00000493091 4345 ntTSL 211.27□□□□□ -0.613e-6■■■□□ 16.5
SUB1P53999 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.23□□□□□ -0.613e-6■■■□□ 16.5
SUB1P53999 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.627e-9■■■□□ 16.5
SUB1P53999 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.633e-6■■■□□ 16.5
SUB1P53999 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.643e-6■■■□□ 16.5
SUB1P53999 PILRB-203ENST00000431140 772 ntTSL 310.95□□□□□ -0.663e-6■■■□□ 16.5
SUB1P53999 APOBEC3B-202ENST00000335760 1359 ntTSL 1 (best)10.94□□□□□ -0.663e-6■■■□□ 16.5
SUB1P53999 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.663e-6■■■□□ 16.5
SUB1P53999 TECR-216ENST00000598987 1202 ntTSL 210.85□□□□□ -0.673e-6■■■□□ 16.5
SUB1P53999 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC10.85□□□□□ -0.673e-6■■■□□ 16.5
SUB1P53999 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.673e-6■■■□□ 16.5
SUB1P53999 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.82□□□□□ -0.683e-6■■■□□ 16.5
SUB1P53999 MAX-212ENST00000555932 1673 ntTSL 5 BASIC10.8□□□□□ -0.683e-6■■■□□ 16.5
SUB1P53999 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.713e-6■■■□□ 16.5
SUB1P53999 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.723e-6■■■□□ 16.5
SUB1P53999 DBNL-212ENST00000452661 897 ntTSL 210.41□□□□□ -0.743e-6■■■□□ 16.5
SUB1P53999 PILRB-209ENST00000455145 902 ntTSL 510.39□□□□□ -0.753e-6■■■□□ 16.5
SUB1P53999 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.753e-6■■■□□ 16.5
SUB1P53999 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.753e-6■■■□□ 16.5
SUB1P53999 MAX-206ENST00000394606 2097 ntTSL 1 (best)10.29□□□□□ -0.763e-6■■■□□ 16.5
SUB1P53999 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.773e-6■■■□□ 16.5
SUB1P53999 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC10.26□□□□□ -0.773e-6■■■□□ 16.5
SUB1P53999 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.783e-6■■■□□ 16.5
SUB1P53999 TECR-211ENST00000598298 868 ntTSL 510.11□□□□□ -0.793e-6■■■□□ 16.5
SUB1P53999 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC10.1□□□□□ -0.797e-9■■■□□ 16.5
SUB1P53999 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.83e-6■■■□□ 16.5
SUB1P53999 VIRMA-206ENST00000522196 574 ntTSL 29.92□□□□□ -0.823e-6■■■□□ 16.5
SUB1P53999 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.837e-9■■■□□ 16.5
SUB1P53999 MAX-216ENST00000556979 615 ntTSL 3 BASIC9.65□□□□□ -0.863e-6■■■□□ 16.5
SUB1P53999 MAX-214ENST00000556702 520 ntTSL 29.65□□□□□ -0.863e-6■■■□□ 16.5
SUB1P53999 HDAC6-230ENST00000488543 2484 ntTSL 29.63□□□□□ -0.877e-9■■■□□ 16.5
SUB1P53999 HDAC6-228ENST00000486227 4718 ntTSL 29.62□□□□□ -0.877e-9■■■□□ 16.5
SUB1P53999 RPS3A-209ENST00000510993 762 ntTSL 59.49□□□□□ -0.897e-9■■■□□ 16.5
SUB1P53999 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.93e-6■■■□□ 16.5
SUB1P53999 HDAC6-203ENST00000376619 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.937e-9■■■□□ 16.5
SUB1P53999 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.963e-6■■■□□ 16.5
SUB1P53999 MAX-209ENST00000554709 327 ntTSL 49.03□□□□□ -0.963e-6■■■□□ 16.5
SUB1P53999 STAG3L5P-PVRIG2P-PILRB-204ENST00000472646 553 ntTSL 58.96□□□□□ -0.983e-6■■■□□ 16.5
SUB1P53999 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.983e-6■■■□□ 16.5
SUB1P53999 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC8.93□□□□□ -0.983e-6■■■□□ 16.5
SUB1P53999 TECR-205ENST00000594807 569 ntTSL 48.89□□□□□ -0.993e-6■■■□□ 16.5
SUB1P53999 MAX-202ENST00000284165 3155 ntTSL 1 (best) BASIC8.86□□□□□ -0.993e-6■■■□□ 16.5
SUB1P53999 APOBEC3B-201ENST00000333467 1533 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -13e-6■■■□□ 16.5
SUB1P53999 YARS-208ENST00000487404 2197 ntTSL 28.76□□□□□ -1.012e-11■■■□□ 16.5
SUB1P53999 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC8.75□□□□□ -1.013e-6■■■□□ 16.5
SUB1P53999 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.045e-7■■■□□ 16.5
SUB1P53999 TGM2-205ENST00000469269 3467 ntTSL 28.48□□□□□ -1.057e-9■■■□□ 16.5
SUB1P53999 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.053e-6■■■□□ 16.5
SUB1P53999 ACACA-245ENST00000619546 5315 ntTSL 1 (best)8.44□□□□□ -1.067e-9■■■□□ 16.5
SUB1P53999 DDX23-201ENST00000308025 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.083e-6■■■□□ 16.5
SUB1P53999 PILRB-212ENST00000608825 587 ntAPPRIS ALT2 TSL 38.3□□□□□ -1.083e-6■■■□□ 16.5
SUB1P53999 TECR-219ENST00000600076 484 ntTSL 38.16□□□□□ -1.13e-6■■■□□ 16.5
SUB1P53999 TECR-224ENST00000601461 828 ntTSL 38.16□□□□□ -1.13e-6■■■□□ 16.5
SUB1P53999 TECR-215ENST00000598918 314 ntTSL 38.07□□□□□ -1.123e-6■■■□□ 16.5
SUB1P53999 CHORDC1-202ENST00000457199 2003 ntTSL 1 (best) BASIC8.01□□□□□ -1.133e-6■■■□□ 16.5
SUB1P53999 TECR-212ENST00000598333 822 ntTSL 37.91□□□□□ -1.143e-6■■■□□ 16.5
SUB1P53999 MAX-213ENST00000556443 585 ntTSL 2 BASIC7.86□□□□□ -1.153e-6■■■□□ 16.5
SUB1P53999 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC7.68□□□□□ -1.187e-9■■■□□ 16.5
Retrieved 100 of 11,644 protein–RNA pairs in 175.9 ms