Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SRP9P49458 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SRP9P49458 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.37■□□□□ 0.37
SRP9P49458 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.37■□□□□ 0.37
SRP9P49458 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.37■□□□□ 0.37
SRP9P49458 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.37■□□□□ 0.37
SRP9P49458 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.37■□□□□ 0.37
SRP9P49458 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SRP9P49458 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SRP9P49458 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.37■□□□□ 0.37
SRP9P49458 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SRP9P49458 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP9P49458 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRP9P49458 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SRP9P49458 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP9P49458 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.36■□□□□ 0.37
SRP9P49458 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP9P49458 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.36■□□□□ 0.37
SRP9P49458 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP9P49458 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.36■□□□□ 0.37
SRP9P49458 AC093787.1-201ENST00000450396 207 ntBASIC17.36■□□□□ 0.37
SRP9P49458 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRP9P49458 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.36■□□□□ 0.37
SRP9P49458 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP9P49458 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.36■□□□□ 0.37
SRP9P49458 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SRP9P49458 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRP9P49458 CYP21A1P-202ENST00000354927 1481 ntBASIC17.36■□□□□ 0.37
SRP9P49458 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SRP9P49458 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
SRP9P49458 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SRP9P49458 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.35■□□□□ 0.37
SRP9P49458 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP9P49458 AL691432.2-201ENST00000607222 2038 ntBASIC17.35■□□□□ 0.37
SRP9P49458 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.35■□□□□ 0.37
SRP9P49458 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP9P49458 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.35■□□□□ 0.37
SRP9P49458 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.35■□□□□ 0.37
SRP9P49458 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.35■□□□□ 0.37
SRP9P49458 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.35■□□□□ 0.37
SRP9P49458 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.35■□□□□ 0.37
SRP9P49458 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP9P49458 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SRP9P49458 AL109923.1-201ENST00000618799 583 ntBASIC17.35■□□□□ 0.37
SRP9P49458 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SRP9P49458 AC020763.4-201ENST00000623414 4170 ntBASIC17.35■□□□□ 0.37
SRP9P49458 AC087633.2-202ENST00000565166 1439 ntBASIC17.35■□□□□ 0.37
SRP9P49458 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.35■□□□□ 0.37
SRP9P49458 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.35■□□□□ 0.37
SRP9P49458 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRP9P49458 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.34■□□□□ 0.37
SRP9P49458 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SRP9P49458 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.34■□□□□ 0.37
SRP9P49458 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms