Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP13P45452 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.39■□□□□ 0.86
MMP13P45452 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.39■□□□□ 0.86
MMP13P45452 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP13P45452 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP13P45452 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP13P45452 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.39■□□□□ 0.86
MMP13P45452 BX119927.1-201ENST00000636596 1552 ntBASIC20.39■□□□□ 0.85
MMP13P45452 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.39■□□□□ 0.85
MMP13P45452 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP13P45452 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP13P45452 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP13P45452 HLA-B-256ENST00000639848 1089 ntBASIC20.39■□□□□ 0.85
MMP13P45452 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MMP13P45452 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP13P45452 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MMP13P45452 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
MMP13P45452 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
MMP13P45452 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
MMP13P45452 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.38■□□□□ 0.85
MMP13P45452 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MMP13P45452 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.38■□□□□ 0.85
MMP13P45452 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.38■□□□□ 0.85
MMP13P45452 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP13P45452 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
MMP13P45452 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
MMP13P45452 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.37■□□□□ 0.85
MMP13P45452 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
MMP13P45452 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MMP13P45452 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MMP13P45452 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
MMP13P45452 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.37■□□□□ 0.85
MMP13P45452 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.37■□□□□ 0.85
MMP13P45452 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
MMP13P45452 AC092368.3-202ENST00000574180 1591 ntBASIC20.37■□□□□ 0.85
MMP13P45452 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 NEFHP1-201ENST00000412845 2629 ntBASIC20.37■□□□□ 0.85
MMP13P45452 Z82202.1-201ENST00000623446 1880 ntBASIC20.37■□□□□ 0.85
MMP13P45452 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
MMP13P45452 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.37■□□□□ 0.85
MMP13P45452 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP13P45452 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.36■□□□□ 0.85
MMP13P45452 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.36■□□□□ 0.85
MMP13P45452 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.36■□□□□ 0.85
MMP13P45452 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.36■□□□□ 0.85
MMP13P45452 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.36■□□□□ 0.85
MMP13P45452 AL390719.1-204ENST00000412397 1219 ntBASIC20.36■□□□□ 0.85
MMP13P45452 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.36■□□□□ 0.85
MMP13P45452 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.36■□□□□ 0.85
MMP13P45452 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 AC060766.5-201ENST00000590539 871 ntBASIC20.36■□□□□ 0.85
MMP13P45452 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms