Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.69■■□□□ 1.06
RFC5P40937 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RFC5P40937 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RFC5P40937 AC026471.5-201ENST00000615068 467 ntBASIC21.69■■□□□ 1.06
RFC5P40937 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 KRT8P8-201ENST00000434750 1448 ntBASIC21.69■■□□□ 1.06
RFC5P40937 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.69■■□□□ 1.06
RFC5P40937 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC5P40937 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RFC5P40937 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.68■■□□□ 1.06
RFC5P40937 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.68■■□□□ 1.06
RFC5P40937 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RFC5P40937 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.68■■□□□ 1.06
RFC5P40937 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.68■■□□□ 1.06
RFC5P40937 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.68■■□□□ 1.06
RFC5P40937 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.68■■□□□ 1.06
RFC5P40937 AL445675.2-201ENST00000620291 557 ntBASIC21.68■■□□□ 1.06
RFC5P40937 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.68■■□□□ 1.06
RFC5P40937 KRT16P1-201ENST00000399124 1418 ntBASIC21.68■■□□□ 1.06
RFC5P40937 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RFC5P40937 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RFC5P40937 AC073130.3-201ENST00000624389 2278 ntBASIC21.68■■□□□ 1.06
RFC5P40937 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.68■■□□□ 1.06
RFC5P40937 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC5P40937 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.67■■□□□ 1.06
RFC5P40937 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RFC5P40937 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RFC5P40937 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.67■■□□□ 1.06
RFC5P40937 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
RFC5P40937 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.67■■□□□ 1.06
RFC5P40937 AL355355.2-201ENST00000442321 338 ntBASIC21.67■■□□□ 1.06
RFC5P40937 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.67■■□□□ 1.06
RFC5P40937 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RFC5P40937 CR392000.1-201ENST00000624770 1228 ntBASIC21.67■■□□□ 1.06
RFC5P40937 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RFC5P40937 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.67■■□□□ 1.06
RFC5P40937 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC5P40937 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RFC5P40937 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC5P40937 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.66■■□□□ 1.06
RFC5P40937 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC5P40937 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RFC5P40937 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RFC5P40937 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFC5P40937 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.66■■□□□ 1.06
RFC5P40937 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.66■■□□□ 1.06
RFC5P40937 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFC5P40937 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC5P40937 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC5P40937 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC5P40937 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RFC5P40937 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC5P40937 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RFC5P40937 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC5P40937 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC5P40937 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.65■■□□□ 1.06
RFC5P40937 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RFC5P40937 NUDT16P1-203ENST00000513809 620 ntBASIC21.65■■□□□ 1.06
RFC5P40937 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.65■■□□□ 1.06
RFC5P40937 AP003071.4-201ENST00000562276 1284 ntBASIC21.65■■□□□ 1.06
RFC5P40937 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC5P40937 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC5P40937 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.65■■□□□ 1.06
RFC5P40937 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.65■■□□□ 1.06
RFC5P40937 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms