Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.47■□□□□ 0.87
SCNN1AP37088 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCNN1AP37088 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.47■□□□□ 0.87
SCNN1AP37088 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.47■□□□□ 0.87
SCNN1AP37088 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.47■□□□□ 0.87
SCNN1AP37088 AL023875.1-201ENST00000640777 796 ntBASIC20.47■□□□□ 0.87
SCNN1AP37088 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCNN1AP37088 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SCNN1AP37088 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCNN1AP37088 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.47■□□□□ 0.87
SCNN1AP37088 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SCNN1AP37088 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCNN1AP37088 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.46■□□□□ 0.87
SCNN1AP37088 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.46■□□□□ 0.87
SCNN1AP37088 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 KRASP1-201ENST00000407852 552 ntBASIC20.46■□□□□ 0.87
SCNN1AP37088 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.46■□□□□ 0.87
SCNN1AP37088 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.46■□□□□ 0.87
SCNN1AP37088 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SCNN1AP37088 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.46■□□□□ 0.87
SCNN1AP37088 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SCNN1AP37088 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
SCNN1AP37088 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SCNN1AP37088 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
SCNN1AP37088 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.46■□□□□ 0.87
SCNN1AP37088 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCNN1AP37088 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.87
SCNN1AP37088 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.45■□□□□ 0.86
SCNN1AP37088 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 AL158211.5-201ENST00000623583 2518 ntBASIC20.45■□□□□ 0.86
SCNN1AP37088 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.45■□□□□ 0.86
SCNN1AP37088 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SCNN1AP37088 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.45■□□□□ 0.86
SCNN1AP37088 KRT16P5-201ENST00000455284 522 ntBASIC20.45■□□□□ 0.86
SCNN1AP37088 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.45■□□□□ 0.86
SCNN1AP37088 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.45■□□□□ 0.86
SCNN1AP37088 AC110285.5-201ENST00000611501 352 ntBASIC20.45■□□□□ 0.86
SCNN1AP37088 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.45■□□□□ 0.86
SCNN1AP37088 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.45■□□□□ 0.86
SCNN1AP37088 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.45■□□□□ 0.86
SCNN1AP37088 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCNN1AP37088 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
SCNN1AP37088 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.44■□□□□ 0.86
SCNN1AP37088 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SCNN1AP37088 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.44■□□□□ 0.86
SCNN1AP37088 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.44■□□□□ 0.86
SCNN1AP37088 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.44■□□□□ 0.86
SCNN1AP37088 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.44■□□□□ 0.86
SCNN1AP37088 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SCNN1AP37088 C1QL1P1-201ENST00000568105 661 ntBASIC20.44■□□□□ 0.86
SCNN1AP37088 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SCNN1AP37088 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.44■□□□□ 0.86
SCNN1AP37088 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCNN1AP37088 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.44■□□□□ 0.86
SCNN1AP37088 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SCNN1AP37088 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.43■□□□□ 0.86
SCNN1AP37088 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.43■□□□□ 0.86
SCNN1AP37088 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 KRT18P29-201ENST00000397031 1267 ntBASIC20.43■□□□□ 0.86
SCNN1AP37088 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SCNN1AP37088 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SCNN1AP37088 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.43■□□□□ 0.86
SCNN1AP37088 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.43■□□□□ 0.86
SCNN1AP37088 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.43■□□□□ 0.86
SCNN1AP37088 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.43■□□□□ 0.86
SCNN1AP37088 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.43■□□□□ 0.86
SCNN1AP37088 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCNN1AP37088 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SCNN1AP37088 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms