Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CTNNA1P35221 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.7■□□□□ 0.9
CTNNA1P35221 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CTNNA1P35221 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.7■□□□□ 0.9
CTNNA1P35221 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.7■□□□□ 0.9
CTNNA1P35221 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 KRT17P1-201ENST00000399211 1546 ntBASIC20.7■□□□□ 0.9
CTNNA1P35221 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.7■□□□□ 0.9
CTNNA1P35221 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 AC093787.1-201ENST00000450396 207 ntBASIC20.7■□□□□ 0.9
CTNNA1P35221 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.7■□□□□ 0.9
CTNNA1P35221 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.7■□□□□ 0.9
CTNNA1P35221 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.7■□□□□ 0.9
CTNNA1P35221 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.7■□□□□ 0.9
CTNNA1P35221 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CTNNA1P35221 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CTNNA1P35221 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNNA1P35221 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.69■□□□□ 0.9
CTNNA1P35221 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.69■□□□□ 0.9
CTNNA1P35221 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 AL512625.2-201ENST00000417533 625 ntBASIC20.69■□□□□ 0.9
CTNNA1P35221 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.69■□□□□ 0.9
CTNNA1P35221 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.69■□□□□ 0.9
CTNNA1P35221 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.69■□□□□ 0.9
CTNNA1P35221 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CTNNA1P35221 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNNA1P35221 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CTNNA1P35221 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.68■□□□□ 0.9
CTNNA1P35221 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CTNNA1P35221 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CTNNA1P35221 AL162430.1-201ENST00000480705 870 ntBASIC20.68■□□□□ 0.9
CTNNA1P35221 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.68■□□□□ 0.9
CTNNA1P35221 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
CTNNA1P35221 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.68■□□□□ 0.9
CTNNA1P35221 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNNA1P35221 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.67■□□□□ 0.9
CTNNA1P35221 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTNNA1P35221 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CTNNA1P35221 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CTNNA1P35221 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CTNNA1P35221 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CTNNA1P35221 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.67■□□□□ 0.9
CTNNA1P35221 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.67■□□□□ 0.9
CTNNA1P35221 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.67■□□□□ 0.9
CTNNA1P35221 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.67■□□□□ 0.9
CTNNA1P35221 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNNA1P35221 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNNA1P35221 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNNA1P35221 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CTNNA1P35221 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNNA1P35221 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNNA1P35221 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTNNA1P35221 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms