Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXA6P31267 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXA6P31267 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXA6P31267 AL691432.3-201ENST00000621860 400 ntBASIC19.47■□□□□ 0.71
HOXA6P31267 AL023973.1-201ENST00000624619 620 ntBASIC19.47■□□□□ 0.71
HOXA6P31267 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA6P31267 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA6P31267 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HOXA6P31267 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXA6P31267 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXA6P31267 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA6P31267 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA6P31267 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXA6P31267 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA6P31267 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA6P31267 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HOXA6P31267 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA6P31267 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXA6P31267 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HOXA6P31267 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXA6P31267 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.46■□□□□ 0.71
HOXA6P31267 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXA6P31267 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXA6P31267 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXA6P31267 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXA6P31267 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXA6P31267 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
HOXA6P31267 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA6P31267 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA6P31267 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.7
HOXA6P31267 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXA6P31267 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA6P31267 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXA6P31267 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXA6P31267 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXA6P31267 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 CKBP1-201ENST00000565489 1086 ntBASIC19.45■□□□□ 0.7
HOXA6P31267 AL160286.2-201ENST00000567150 934 ntBASIC19.45■□□□□ 0.7
HOXA6P31267 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA6P31267 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA6P31267 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA6P31267 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA6P31267 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA6P31267 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HOXA6P31267 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA6P31267 VENTXP5-201ENST00000523979 775 ntBASIC19.44■□□□□ 0.7
HOXA6P31267 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.44■□□□□ 0.7
HOXA6P31267 NEK4P2-201ENST00000580004 1012 ntBASIC19.44■□□□□ 0.7
HOXA6P31267 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
HOXA6P31267 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA6P31267 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA6P31267 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA6P31267 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.44■□□□□ 0.7
HOXA6P31267 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA6P31267 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA6P31267 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA6P31267 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA6P31267 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA6P31267 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HOXA6P31267 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HOXA6P31267 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms