Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 AC006015.1-201ENST00000429970 570 ntBASIC18.23■□□□□ 0.51
TNFRSF1BP20333 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF1BP20333 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 AC093787.1-201ENST00000450396 207 ntBASIC18.22■□□□□ 0.51
TNFRSF1BP20333 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 AC069236.1-201ENST00000604339 616 ntBASIC18.22■□□□□ 0.51
TNFRSF1BP20333 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF1BP20333 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 C2orf69P4-201ENST00000565394 541 ntBASIC18.21■□□□□ 0.51
TNFRSF1BP20333 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.21■□□□□ 0.51
TNFRSF1BP20333 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 AC008694.1-202ENST00000636953 945 ntBASIC18.21■□□□□ 0.51
TNFRSF1BP20333 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 AC010980.2-201ENST00000587099 1412 ntBASIC18.21■□□□□ 0.51
TNFRSF1BP20333 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF1BP20333 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TNFRSF1BP20333 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms