Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TREX1-205ENST00000625293 1783 ntBASIC19.83■□□□□ 0.76
HLA-DPA1P20036 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 AC026366.1-201ENST00000488803 879 ntBASIC19.82■□□□□ 0.76
HLA-DPA1P20036 CD99P1-205ENST00000527459 561 ntBASIC19.82■□□□□ 0.76
HLA-DPA1P20036 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HLA-DPA1P20036 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPA1P20036 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.8■□□□□ 0.76
HLA-DPA1P20036 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 AP006587.1-201ENST00000534129 1502 ntBASIC19.79■□□□□ 0.76
HLA-DPA1P20036 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPA1P20036 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms