Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT4P19013 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KRT4P19013 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT4P19013 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KRT4P19013 KRT18P61-201ENST00000585825 1298 ntBASIC19.67■□□□□ 0.74
KRT4P19013 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 AC010536.3-201ENST00000620306 533 ntBASIC19.67■□□□□ 0.74
KRT4P19013 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT4P19013 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT4P19013 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT4P19013 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.67■□□□□ 0.74
KRT4P19013 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT4P19013 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KRT4P19013 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT4P19013 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT4P19013 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
KRT4P19013 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KRT4P19013 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 PHGDH-210ENST00000641115 1638 ntBASIC19.66■□□□□ 0.74
KRT4P19013 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
KRT4P19013 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
KRT4P19013 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
KRT4P19013 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 AL162412.1-201ENST00000567129 965 ntBASIC19.66■□□□□ 0.74
KRT4P19013 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KRT4P19013 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT4P19013 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.66■□□□□ 0.74
KRT4P19013 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
KRT4P19013 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.65■□□□□ 0.74
KRT4P19013 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
KRT4P19013 AC007613.1-201ENST00000572811 2597 ntBASIC19.65■□□□□ 0.74
KRT4P19013 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
KRT4P19013 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT4P19013 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.65■□□□□ 0.74
KRT4P19013 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT4P19013 AC020763.4-201ENST00000623414 4170 ntBASIC19.65■□□□□ 0.74
KRT4P19013 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
KRT4P19013 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT4P19013 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT4P19013 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
KRT4P19013 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
KRT4P19013 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
KRT4P19013 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT4P19013 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT4P19013 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT4P19013 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
KRT4P19013 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT4P19013 HLA-G-202ENST00000376815 851 ntBASIC19.64■□□□□ 0.73
KRT4P19013 HLA-G-203ENST00000376818 1127 ntBASIC19.64■□□□□ 0.73
KRT4P19013 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.64■□□□□ 0.73
KRT4P19013 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT4P19013 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT4P19013 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT4P19013 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT4P19013 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
KRT4P19013 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KRT4P19013 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT4P19013 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT4P19013 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT4P19013 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
KRT4P19013 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT4P19013 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT4P19013 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms