Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.96■□□□□ 0.79
SRFP11831 VENTXP5-201ENST00000523979 775 ntBASIC19.96■□□□□ 0.79
SRFP11831 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.96■□□□□ 0.79
SRFP11831 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.96■□□□□ 0.79
SRFP11831 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.96■□□□□ 0.79
SRFP11831 AL136038.3-201ENST00000561909 1096 ntBASIC19.96■□□□□ 0.79
SRFP11831 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRFP11831 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFP11831 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFP11831 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.96■□□□□ 0.79
SRFP11831 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFP11831 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SRFP11831 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFP11831 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRFP11831 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRFP11831 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRFP11831 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SRFP11831 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFP11831 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
SRFP11831 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFP11831 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFP11831 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
SRFP11831 KRT18P38-201ENST00000449496 1282 ntBASIC19.95■□□□□ 0.78
SRFP11831 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.95■□□□□ 0.78
SRFP11831 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.95■□□□□ 0.78
SRFP11831 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.95■□□□□ 0.78
SRFP11831 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SRFP11831 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.95■□□□□ 0.78
SRFP11831 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.95■□□□□ 0.78
SRFP11831 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.95■□□□□ 0.78
SRFP11831 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SRFP11831 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFP11831 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.95■□□□□ 0.78
SRFP11831 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFP11831 FBXW4P1-201ENST00000426721 2239 ntBASIC19.95■□□□□ 0.78
SRFP11831 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFP11831 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFP11831 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SRFP11831 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.94■□□□□ 0.78
SRFP11831 KRT8P8-201ENST00000434750 1448 ntBASIC19.94■□□□□ 0.78
SRFP11831 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SRFP11831 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.94■□□□□ 0.78
SRFP11831 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SRFP11831 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.94■□□□□ 0.78
SRFP11831 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.94■□□□□ 0.78
SRFP11831 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.94■□□□□ 0.78
SRFP11831 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.94■□□□□ 0.78
SRFP11831 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SRFP11831 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.94■□□□□ 0.78
SRFP11831 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFP11831 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.93■□□□□ 0.78
SRFP11831 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 AP000523.1-201ENST00000398242 1049 ntBASIC19.93■□□□□ 0.78
SRFP11831 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.93■□□□□ 0.78
SRFP11831 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.93■□□□□ 0.78
SRFP11831 AP003041.3-201ENST00000527151 707 ntBASIC19.93■□□□□ 0.78
SRFP11831 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.93■□□□□ 0.78
SRFP11831 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.93■□□□□ 0.78
SRFP11831 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.93■□□□□ 0.78
SRFP11831 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.93■□□□□ 0.78
SRFP11831 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFP11831 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SRFP11831 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.92■□□□□ 0.78
SRFP11831 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.92■□□□□ 0.78
SRFP11831 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.92■□□□□ 0.78
SRFP11831 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.92■□□□□ 0.78
SRFP11831 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.92■□□□□ 0.78
SRFP11831 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.92■□□□□ 0.78
SRFP11831 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFP11831 AL160286.2-201ENST00000567150 934 ntBASIC19.92■□□□□ 0.78
SRFP11831 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.92■□□□□ 0.78
SRFP11831 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms