Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 KRT18P48-201ENST00000434763 852 ntBASIC19.82■□□□□ 0.76
RETP07949 ECEL1P2-202ENST00000465689 757 ntBASIC19.82■□□□□ 0.76
RETP07949 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RETP07949 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.82■□□□□ 0.76
RETP07949 AP005242.2-201ENST00000580065 1175 ntBASIC19.82■□□□□ 0.76
RETP07949 AL031985.4-201ENST00000642138 673 ntBASIC19.82■□□□□ 0.76
RETP07949 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RETP07949 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RETP07949 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RETP07949 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RETP07949 FSCN1P1-201ENST00000568912 1481 ntBASIC19.81■□□□□ 0.76
RETP07949 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.81■□□□□ 0.76
RETP07949 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RETP07949 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
RETP07949 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 AC128688.1-201ENST00000487626 519 ntBASIC19.81■□□□□ 0.76
RETP07949 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RETP07949 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RETP07949 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RETP07949 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.81■□□□□ 0.76
RETP07949 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RETP07949 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RETP07949 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.8■□□□□ 0.76
RETP07949 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RETP07949 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.8■□□□□ 0.76
RETP07949 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
RETP07949 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.8■□□□□ 0.76
RETP07949 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.8■□□□□ 0.76
RETP07949 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RETP07949 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.8■□□□□ 0.76
RETP07949 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RETP07949 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RETP07949 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.8■□□□□ 0.76
RETP07949 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.79■□□□□ 0.76
RETP07949 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
RETP07949 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
RETP07949 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.79■□□□□ 0.76
RETP07949 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.79■□□□□ 0.76
RETP07949 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 FAM8A6P-201ENST00000407496 1135 ntBASIC19.79■□□□□ 0.76
RETP07949 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 CRYGFP-201ENST00000418459 633 ntBASIC19.79■□□□□ 0.76
RETP07949 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.79■□□□□ 0.76
RETP07949 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.79■□□□□ 0.76
RETP07949 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
RETP07949 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.79■□□□□ 0.76
RETP07949 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.79■□□□□ 0.76
RETP07949 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.79■□□□□ 0.76
RETP07949 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RETP07949 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RETP07949 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.79■□□□□ 0.76
RETP07949 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RETP07949 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RETP07949 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RETP07949 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.78■□□□□ 0.76
RETP07949 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
RETP07949 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.78■□□□□ 0.76
RETP07949 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RETP07949 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RETP07949 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RETP07949 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
RETP07949 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.78■□□□□ 0.76
RETP07949 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.78■□□□□ 0.76
RETP07949 AC009947.2-201ENST00000444014 672 ntBASIC19.78■□□□□ 0.76
RETP07949 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.78■□□□□ 0.76
RETP07949 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms