Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.79□□□□□ -0.36
TRACP01848 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.79□□□□□ -0.36
TRACP01848 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRACP01848 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.79□□□□□ -0.36
TRACP01848 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.79□□□□□ -0.36
TRACP01848 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRACP01848 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRACP01848 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.78□□□□□ -0.36
TRACP01848 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRACP01848 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TRACP01848 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRACP01848 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.78□□□□□ -0.36
TRACP01848 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.78□□□□□ -0.36
TRACP01848 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.78□□□□□ -0.36
TRACP01848 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
TRACP01848 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.78□□□□□ -0.36
TRACP01848 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.78□□□□□ -0.36
TRACP01848 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.78□□□□□ -0.36
TRACP01848 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.78□□□□□ -0.36
TRACP01848 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.78□□□□□ -0.36
TRACP01848 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
TRACP01848 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
TRACP01848 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.78□□□□□ -0.36
TRACP01848 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRACP01848 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRACP01848 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRACP01848 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
TRACP01848 BX119927.1-201ENST00000636596 1552 ntBASIC12.77□□□□□ -0.36
TRACP01848 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRACP01848 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRACP01848 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRACP01848 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.77□□□□□ -0.36
TRACP01848 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRACP01848 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRACP01848 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRACP01848 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.77□□□□□ -0.36
TRACP01848 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.77□□□□□ -0.36
TRACP01848 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.77□□□□□ -0.36
TRACP01848 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.77□□□□□ -0.36
TRACP01848 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
TRACP01848 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC12.77□□□□□ -0.37
TRACP01848 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 ABHD17AP4-201ENST00000411545 909 ntBASIC12.77□□□□□ -0.37
TRACP01848 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC12.77□□□□□ -0.37
TRACP01848 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
TRACP01848 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.77□□□□□ -0.37
TRACP01848 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.77□□□□□ -0.37
TRACP01848 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRACP01848 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRACP01848 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.77□□□□□ -0.37
TRACP01848 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
TRACP01848 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRACP01848 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRACP01848 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRACP01848 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRACP01848 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
TRACP01848 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRACP01848 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.76□□□□□ -0.37
TRACP01848 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRACP01848 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRACP01848 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.76□□□□□ -0.37
TRACP01848 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRACP01848 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRACP01848 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms