Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.72■□□□□ 0.75
VAPBO95292 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VAPBO95292 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.72■□□□□ 0.75
VAPBO95292 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
VAPBO95292 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.72■□□□□ 0.75
VAPBO95292 AC005332.7-201ENST00000614046 2005 ntBASIC19.72■□□□□ 0.75
VAPBO95292 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.72■□□□□ 0.75
VAPBO95292 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VAPBO95292 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.72■□□□□ 0.75
VAPBO95292 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.72■□□□□ 0.75
VAPBO95292 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.72■□□□□ 0.75
VAPBO95292 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VAPBO95292 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.71■□□□□ 0.75
VAPBO95292 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.71■□□□□ 0.75
VAPBO95292 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VAPBO95292 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VAPBO95292 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.71■□□□□ 0.75
VAPBO95292 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.71■□□□□ 0.75
VAPBO95292 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.71■□□□□ 0.75
VAPBO95292 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.71■□□□□ 0.75
VAPBO95292 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
VAPBO95292 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
VAPBO95292 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VAPBO95292 AC092368.3-202ENST00000574180 1591 ntBASIC19.7■□□□□ 0.74
VAPBO95292 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VAPBO95292 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.7■□□□□ 0.74
VAPBO95292 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPBO95292 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
VAPBO95292 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPBO95292 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.7■□□□□ 0.74
VAPBO95292 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.7■□□□□ 0.74
VAPBO95292 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPBO95292 AC090192.1-201ENST00000517740 490 ntBASIC19.7■□□□□ 0.74
VAPBO95292 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.7■□□□□ 0.74
VAPBO95292 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.7■□□□□ 0.74
VAPBO95292 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
VAPBO95292 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VAPBO95292 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VAPBO95292 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VAPBO95292 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.7■□□□□ 0.74
VAPBO95292 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPBO95292 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.7■□□□□ 0.74
VAPBO95292 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.7■□□□□ 0.74
VAPBO95292 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 AC124283.5-201ENST00000624661 1809 ntBASIC19.69■□□□□ 0.74
VAPBO95292 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.69■□□□□ 0.74
VAPBO95292 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.69■□□□□ 0.74
VAPBO95292 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.69■□□□□ 0.74
VAPBO95292 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.69■□□□□ 0.74
VAPBO95292 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.69■□□□□ 0.74
VAPBO95292 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 TFP1-202ENST00000475455 1573 ntBASIC19.69■□□□□ 0.74
VAPBO95292 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VAPBO95292 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPBO95292 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.69■□□□□ 0.74
VAPBO95292 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VAPBO95292 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.68■□□□□ 0.74
VAPBO95292 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
VAPBO95292 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VAPBO95292 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 AC083880.1-201ENST00000608266 535 ntBASIC19.68■□□□□ 0.74
VAPBO95292 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 HLA-B-256ENST00000639848 1089 ntBASIC19.68■□□□□ 0.74
VAPBO95292 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VAPBO95292 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
VAPBO95292 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPBO95292 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VAPBO95292 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.67■□□□□ 0.74
VAPBO95292 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms