Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC8.81□□□□□ -1
USH2AO75445 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC8.81□□□□□ -1
USH2AO75445 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC8.81□□□□□ -1
USH2AO75445 BX842568.4-201ENST00000421222 227 ntBASIC8.81□□□□□ -1
USH2AO75445 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC8.81□□□□□ -1
USH2AO75445 TPSP2-201ENST00000561760 610 ntBASIC8.81□□□□□ -1
USH2AO75445 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC8.81□□□□□ -1
USH2AO75445 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
USH2AO75445 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 CALM3-202ENST00000391918 702 ntTSL 2 BASIC8.8□□□□□ -1
USH2AO75445 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC8.8□□□□□ -1
USH2AO75445 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC8.8□□□□□ -1
USH2AO75445 DFFB-203ENST00000341385 572 ntTSL 5 BASIC8.8□□□□□ -1
USH2AO75445 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC8.8□□□□□ -1
USH2AO75445 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC8.8□□□□□ -1
USH2AO75445 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
USH2AO75445 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC8.8□□□□□ -1
USH2AO75445 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC8.8□□□□□ -1
USH2AO75445 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC8.8□□□□□ -1
USH2AO75445 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC8.8□□□□□ -1
USH2AO75445 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC8.8□□□□□ -1
USH2AO75445 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
USH2AO75445 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC8.8□□□□□ -1
USH2AO75445 HLA-G-203ENST00000376818 1127 ntBASIC8.8□□□□□ -1
USH2AO75445 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
USH2AO75445 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC8.8□□□□□ -1
USH2AO75445 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
USH2AO75445 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC8.8□□□□□ -1
USH2AO75445 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 WBP2-203ENST00000433525 928 ntTSL 2 BASIC8.8□□□□□ -1
USH2AO75445 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC8.8□□□□□ -1
USH2AO75445 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USH2AO75445 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC8.79□□□□□ -1
USH2AO75445 AL590627.1-203ENST00000421194 1026 ntBASIC8.79□□□□□ -1
USH2AO75445 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC8.79□□□□□ -1
USH2AO75445 AP003041.3-201ENST00000527151 707 ntBASIC8.79□□□□□ -1
USH2AO75445 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC8.79□□□□□ -1
USH2AO75445 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC8.79□□□□□ -1
USH2AO75445 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC8.79□□□□□ -1
USH2AO75445 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
USH2AO75445 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
USH2AO75445 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
USH2AO75445 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC8.79□□□□□ -1
USH2AO75445 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC8.79□□□□□ -1
USH2AO75445 NT5C-210ENST00000582160 860 ntTSL 2 BASIC8.79□□□□□ -1
USH2AO75445 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
USH2AO75445 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC8.79□□□□□ -1
USH2AO75445 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
USH2AO75445 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC8.79□□□□□ -1
USH2AO75445 LINC00265-3P-201ENST00000447588 903 ntBASIC8.79□□□□□ -1
USH2AO75445 TOB2P1-201ENST00000469761 992 ntBASIC8.79□□□□□ -1
USH2AO75445 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
USH2AO75445 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC8.79□□□□□ -1
USH2AO75445 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC8.79□□□□□ -1
USH2AO75445 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
USH2AO75445 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
USH2AO75445 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC8.79□□□□□ -1
USH2AO75445 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC8.79□□□□□ -1
USH2AO75445 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC8.79□□□□□ -1
USH2AO75445 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC8.79□□□□□ -1
USH2AO75445 HLA-A-209ENST00000638375 975 ntBASIC8.79□□□□□ -1
USH2AO75445 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
USH2AO75445 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USH2AO75445 AC080038.3-201ENST00000623346 1952 ntBASIC8.79□□□□□ -1
USH2AO75445 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms