Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA12O60330 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 TERF1P1-201ENST00000311003 1181 ntBASIC19.46■□□□□ 0.71
PCDHGA12O60330 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA12O60330 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA12O60330 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 AC010947.1-201ENST00000623454 693 ntBASIC19.46■□□□□ 0.71
PCDHGA12O60330 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGA12O60330 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA12O60330 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA12O60330 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGA12O60330 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHGA12O60330 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 AL137013.1-201ENST00000432946 1228 ntBASIC19.45■□□□□ 0.7
PCDHGA12O60330 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 CYP2D8P-201ENST00000433633 1490 ntBASIC19.45■□□□□ 0.7
PCDHGA12O60330 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA12O60330 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA12O60330 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 KRT8P20-201ENST00000423953 1409 ntBASIC19.44■□□□□ 0.7
PCDHGA12O60330 AC073508.3-201ENST00000619697 1419 ntBASIC19.44■□□□□ 0.7
PCDHGA12O60330 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA12O60330 AL390955.1-201ENST00000428694 934 ntBASIC19.44■□□□□ 0.7
PCDHGA12O60330 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHGA12O60330 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA12O60330 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.44■□□□□ 0.7
PCDHGA12O60330 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA12O60330 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGA12O60330 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA12O60330 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA12O60330 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA12O60330 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHGA12O60330 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHGA12O60330 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGA12O60330 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA12O60330 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA12O60330 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA12O60330 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 KRT18P57-201ENST00000443599 1254 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms