Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNRC18O15417 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNRC18O15417 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNRC18O15417 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.55■■□□□ 1.04
TNRC18O15417 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNRC18O15417 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.54■■□□□ 1.04
TNRC18O15417 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.54■■□□□ 1.04
TNRC18O15417 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TNRC18O15417 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.54■■□□□ 1.04
TNRC18O15417 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.54■■□□□ 1.04
TNRC18O15417 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.54■■□□□ 1.04
TNRC18O15417 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.54■■□□□ 1.04
TNRC18O15417 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.54■■□□□ 1.04
TNRC18O15417 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TNRC18O15417 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.54■■□□□ 1.04
TNRC18O15417 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNRC18O15417 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TNRC18O15417 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNRC18O15417 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNRC18O15417 CA15P1-201ENST00000481698 905 ntBASIC21.53■■□□□ 1.04
TNRC18O15417 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNRC18O15417 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.53■■□□□ 1.04
TNRC18O15417 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNRC18O15417 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.53■■□□□ 1.04
TNRC18O15417 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.53■■□□□ 1.04
TNRC18O15417 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNRC18O15417 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.53■■□□□ 1.04
TNRC18O15417 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNRC18O15417 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNRC18O15417 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.53■■□□□ 1.04
TNRC18O15417 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.53■■□□□ 1.04
TNRC18O15417 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.53■■□□□ 1.04
TNRC18O15417 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TNRC18O15417 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
TNRC18O15417 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNRC18O15417 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNRC18O15417 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNRC18O15417 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.52■■□□□ 1.04
TNRC18O15417 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TNRC18O15417 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.52■■□□□ 1.04
TNRC18O15417 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TNRC18O15417 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNRC18O15417 UPF3AP3-201ENST00000420996 769 ntBASIC21.52■■□□□ 1.04
TNRC18O15417 RPL13AP23-201ENST00000480739 586 ntBASIC21.52■■□□□ 1.04
TNRC18O15417 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.52■■□□□ 1.04
TNRC18O15417 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.52■■□□□ 1.04
TNRC18O15417 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNRC18O15417 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNRC18O15417 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNRC18O15417 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.51■■□□□ 1.03
TNRC18O15417 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.51■■□□□ 1.03
TNRC18O15417 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.51■■□□□ 1.03
TNRC18O15417 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNRC18O15417 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.51■■□□□ 1.03
TNRC18O15417 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.51■■□□□ 1.03
TNRC18O15417 AL162741.1-201ENST00000565563 1558 ntBASIC21.51■■□□□ 1.03
TNRC18O15417 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNRC18O15417 DRAXINP1-201ENST00000437611 948 ntBASIC21.51■■□□□ 1.03
TNRC18O15417 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.51■■□□□ 1.03
TNRC18O15417 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.51■■□□□ 1.03
TNRC18O15417 TP73-AS1-207ENST00000624167 988 ntBASIC21.51■■□□□ 1.03
TNRC18O15417 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNRC18O15417 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNRC18O15417 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNRC18O15417 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.51■■□□□ 1.03
TNRC18O15417 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.51■■□□□ 1.03
TNRC18O15417 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.5■■□□□ 1.03
TNRC18O15417 AC093525.10-201ENST00000625130 1569 ntBASIC21.5■■□□□ 1.03
TNRC18O15417 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TNRC18O15417 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.5■■□□□ 1.03
TNRC18O15417 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TNRC18O15417 CYMP-203ENST00000474680 1263 ntBASIC21.5■■□□□ 1.03
TNRC18O15417 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.5■■□□□ 1.03
TNRC18O15417 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNRC18O15417 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.5■■□□□ 1.03
TNRC18O15417 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TNRC18O15417 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNRC18O15417 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.5■■□□□ 1.03
TNRC18O15417 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.5■■□□□ 1.03
TNRC18O15417 RFPL4AP1-201ENST00000530883 850 ntBASIC21.5■■□□□ 1.03
TNRC18O15417 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TNRC18O15417 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNRC18O15417 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNRC18O15417 KRT16P6-202ENST00000425692 1426 ntBASIC21.49■■□□□ 1.03
TNRC18O15417 Z85996.1-201ENST00000494644 937 ntBASIC21.49■■□□□ 1.03
TNRC18O15417 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.49■■□□□ 1.03
TNRC18O15417 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.49■■□□□ 1.03
TNRC18O15417 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TNRC18O15417 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNRC18O15417 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNRC18O15417 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNRC18O15417 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms