Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN4O14493 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLDN4O14493 YBX1P10-201ENST00000444752 975 ntBASIC18.51■□□□□ 0.55
CLDN4O14493 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLDN4O14493 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN4O14493 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN4O14493 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN4O14493 AC124016.1-201ENST00000609552 612 ntBASIC18.51■□□□□ 0.55
CLDN4O14493 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLDN4O14493 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN4O14493 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN4O14493 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN4O14493 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN4O14493 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLDN4O14493 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CLDN4O14493 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 RNF165-205ENST00000588679 2904 ntBASIC18.5■□□□□ 0.55
CLDN4O14493 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN4O14493 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN4O14493 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN4O14493 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN4O14493 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN4O14493 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN4O14493 AL158047.1-201ENST00000445918 881 ntBASIC18.49■□□□□ 0.55
CLDN4O14493 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN4O14493 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.49■□□□□ 0.55
CLDN4O14493 AL359736.2-201ENST00000621992 437 ntBASIC18.49■□□□□ 0.55
CLDN4O14493 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN4O14493 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN4O14493 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN4O14493 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN4O14493 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.49■□□□□ 0.55
CLDN4O14493 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN4O14493 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLDN4O14493 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN4O14493 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN4O14493 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN4O14493 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN4O14493 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN4O14493 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN4O14493 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN4O14493 GCSHP5-201ENST00000443090 522 ntBASIC18.48■□□□□ 0.55
CLDN4O14493 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN4O14493 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN4O14493 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN4O14493 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN4O14493 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN4O14493 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN4O14493 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN4O14493 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN4O14493 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN4O14493 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN4O14493 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN4O14493 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN4O14493 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.47■□□□□ 0.55
CLDN4O14493 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms