Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TSPY15P-201ENST00000457163 923 ntBASIC19.75■□□□□ 0.75
TRIM38O00635 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.75■□□□□ 0.75
TRIM38O00635 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.75■□□□□ 0.75
TRIM38O00635 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM38O00635 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRIM38O00635 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM38O00635 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM38O00635 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM38O00635 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM38O00635 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM38O00635 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM38O00635 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM38O00635 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM38O00635 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM38O00635 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM38O00635 LINC01023-201ENST00000606054 436 ntBASIC19.74■□□□□ 0.75
TRIM38O00635 AP001412.1-201ENST00000608405 714 ntBASIC19.74■□□□□ 0.75
TRIM38O00635 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 AC113410.3-201ENST00000623366 203 ntBASIC19.74■□□□□ 0.75
TRIM38O00635 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM38O00635 AL135905.2-201ENST00000584934 1404 ntBASIC19.74■□□□□ 0.75
TRIM38O00635 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM38O00635 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM38O00635 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM38O00635 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 FP700111.2-201ENST00000619190 1892 ntBASIC19.73■□□□□ 0.75
TRIM38O00635 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM38O00635 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM38O00635 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM38O00635 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM38O00635 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM38O00635 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM38O00635 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM38O00635 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM38O00635 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM38O00635 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM38O00635 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM38O00635 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM38O00635 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM38O00635 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM38O00635 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM38O00635 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRIM38O00635 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TRIM38O00635 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 AL020996.1-203ENST00000536896 2307 ntBASIC19.71■□□□□ 0.75
TRIM38O00635 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM38O00635 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM38O00635 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM38O00635 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM38O00635 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM38O00635 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM38O00635 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM38O00635 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRIM38O00635 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM38O00635 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM38O00635 PRKY-204ENST00000533551 1019 ntBASIC19.71■□□□□ 0.75
TRIM38O00635 RARRES2P10-201ENST00000564312 460 ntBASIC19.71■□□□□ 0.75
TRIM38O00635 MIR4785-201ENST00000585005 73 ntBASIC19.71■□□□□ 0.75
TRIM38O00635 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM38O00635 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM38O00635 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.71■□□□□ 0.75
TRIM38O00635 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM38O00635 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM38O00635 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM38O00635 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM38O00635 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM38O00635 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM38O00635 AC011484.1-201ENST00000377652 1995 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms