Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC28A1O00337 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC28A1O00337 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SLC28A1O00337 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC28A1O00337 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC28A1O00337 AL390719.1-204ENST00000412397 1219 ntBASIC18.89■□□□□ 0.61
SLC28A1O00337 BX276092.2-201ENST00000417668 665 ntBASIC18.89■□□□□ 0.61
SLC28A1O00337 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.89■□□□□ 0.61
SLC28A1O00337 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.89■□□□□ 0.61
SLC28A1O00337 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC28A1O00337 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC28A1O00337 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC28A1O00337 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC28A1O00337 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC28A1O00337 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A1O00337 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
SLC28A1O00337 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC28A1O00337 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC28A1O00337 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SLC28A1O00337 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC28A1O00337 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC28A1O00337 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC28A1O00337 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC28A1O00337 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A1O00337 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SLC28A1O00337 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC28A1O00337 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
SLC28A1O00337 CDCA4P2-201ENST00000441182 718 ntBASIC18.87■□□□□ 0.61
SLC28A1O00337 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.87■□□□□ 0.61
SLC28A1O00337 AC026185.1-201ENST00000445748 174 ntBASIC18.87■□□□□ 0.61
SLC28A1O00337 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A1O00337 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC28A1O00337 AC092437.1-201ENST00000624794 1048 ntBASIC18.87■□□□□ 0.61
SLC28A1O00337 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC28A1O00337 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC28A1O00337 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC28A1O00337 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SLC28A1O00337 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC28A1O00337 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC28A1O00337 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC28A1O00337 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC28A1O00337 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC28A1O00337 AL050303.2-201ENST00000619798 666 ntBASIC18.86■□□□□ 0.61
SLC28A1O00337 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC28A1O00337 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC28A1O00337 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SLC28A1O00337 TNXA-203ENST00000507684 2038 ntBASIC18.86■□□□□ 0.61
SLC28A1O00337 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
SLC28A1O00337 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A1O00337 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC28A1O00337 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms