Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDC7O00311 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDC7O00311 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDC7O00311 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC7O00311 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC7O00311 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CDC7O00311 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC7O00311 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.25■□□□□ 0.67
CDC7O00311 AC069152.1-201ENST00000438030 544 ntBASIC19.25■□□□□ 0.67
CDC7O00311 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.25■□□□□ 0.67
CDC7O00311 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.25■□□□□ 0.67
CDC7O00311 PNMA6B-201ENST00000538162 1200 ntBASIC19.25■□□□□ 0.67
CDC7O00311 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.25■□□□□ 0.67
CDC7O00311 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.25■□□□□ 0.67
CDC7O00311 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC7O00311 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.25■□□□□ 0.67
CDC7O00311 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC7O00311 AC060766.5-201ENST00000590539 871 ntBASIC19.25■□□□□ 0.67
CDC7O00311 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC7O00311 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CDC7O00311 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC7O00311 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDC7O00311 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDC7O00311 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC7O00311 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC7O00311 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC7O00311 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDC7O00311 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.24■□□□□ 0.67
CDC7O00311 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.24■□□□□ 0.67
CDC7O00311 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 AC142086.2-201ENST00000569753 217 ntBASIC19.24■□□□□ 0.67
CDC7O00311 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDC7O00311 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.24■□□□□ 0.67
CDC7O00311 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CDC7O00311 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDC7O00311 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC7O00311 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC7O00311 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDC7O00311 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC7O00311 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.23■□□□□ 0.67
CDC7O00311 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.23■□□□□ 0.67
CDC7O00311 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.23■□□□□ 0.67
CDC7O00311 AC133041.1-202ENST00000642053 222 ntBASIC19.23■□□□□ 0.67
CDC7O00311 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDC7O00311 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDC7O00311 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.23■□□□□ 0.67
CDC7O00311 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC7O00311 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.23■□□□□ 0.67
CDC7O00311 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.22■□□□□ 0.67
CDC7O00311 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC7O00311 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC7O00311 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC7O00311 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
CDC7O00311 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms