Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHKB-CPT1BH3BT56 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 TSPY26P-202ENST00000565928 3884 ntBASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 AC006128.1-201ENST00000624704 1661 ntBASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 AC136428.2-201ENST00000563187 214 ntBASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
CHKB-CPT1BH3BT56 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 DYM-203ENST00000442713 2147 ntTSL 2 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms