Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 GUSBP5-202ENST00000510805 1989 ntBASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 SPDYE13P-201ENST00000445314 798 ntBASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C1QTNF9BB2RNN3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 KRT8P36-201ENST00000489121 1440 ntBASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 ECEL1P1-201ENST00000373592 1742 ntBASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 STARP1-201ENST00000397973 869 ntBASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 MIR3180-1-201ENST00000580374 94 ntBASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 MIR3180-3-201ENST00000584616 94 ntBASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.49■□□□□ 0.55
C1QTNF9BB2RNN3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 TSSC2-201ENST00000450217 709 ntBASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 SLC25A6P4-201ENST00000586535 553 ntBASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 LINC02084-201ENST00000606069 1096 ntBASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 AL732292.2-201ENST00000609649 430 ntBASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 AC120114.3-201ENST00000611923 658 ntBASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C1QTNF9BB2RNN3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.47■□□□□ 0.55
C1QTNF9BB2RNN3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms