Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 FAM21FP-204ENST00000608637 956 ntBASIC22■■□□□ 1.11
SPDYE4A6NLX3 AL589743.5-201ENST00000616611 1050 ntBASIC22■■□□□ 1.11
SPDYE4A6NLX3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPDYE4A6NLX3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
SPDYE4A6NLX3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 AC010740.1-201ENST00000417035 684 ntBASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 AL596275.1-201ENST00000423464 877 ntBASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDYE4A6NLX3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 AC006128.1-201ENST00000624704 1661 ntBASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 AC060766.5-201ENST00000590539 871 ntBASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 CYP2T3P-201ENST00000601990 817 ntBASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SPDYE4A6NLX3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SPDYE4A6NLX3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms