Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 AC073210.2-201ENST00000430369 194 ntBASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 TFP1-202ENST00000475455 1573 ntBASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 AL390719.1-204ENST00000412397 1219 ntBASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 AC092666.2-201ENST00000613287 246 ntBASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM49BA6NDI0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM49BA6NDI0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 AL020996.1-203ENST00000536896 2307 ntBASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 AC083880.1-201ENST00000608266 535 ntBASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM49BA6NDI0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms